BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035H02LP1|AL430122
(550 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig814 814 0.0
>3x_Contig814
Length = 3416
Score = 814 bits (409), Expect = 0.0
Identities = 517/550 (94%), Gaps = 4/550 (0%)
Strand = Plus / Plus
Query: 1 atccgctccgcaaatagcagtgaacactttaaatccttcggctgctaacaacgtgttcaa 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1908 atccgctccgcaaatagcagttaacactttaaatccttcggctgctaacaacgtgttcaa 1967
Query: 61 tgccgtcttgaaccaaatcaaaccaggttctcaacagcaaattcaaccacctccagcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1968 tgccgtcttgaaccaaatcaaaccaggttctcaacagcaaattcaaccacctccagcaaa 2027
Query: 121 ttctctgccttacaatttcactgtgcccccacatatggttcctggtggtattcctcatcc 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2028 ttctctgccttacaatttcactgttcccccacatatggttcctggtggtattcctcatcc 2087
Query: 181 tcttatgatgcagccgcctttcattccgaataatgagcatattgcttatgtcagcgcctc 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 2088 tcttatgatgcagccgcctttcattccgaataatgagcatattgcttatg-cagctcctc 2146
Query: 241 ctcagtcacaacctgtacaaaataccaccattagataaagaggcaaccaggaatcttaag 300
||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 2147 ctcagtcacaacctgtacaaaat-ccaccattagataaagaggcatccaggaatcttaag 2205
Query: 301 aatcacccaaatagagaagagaatggtacggacagcaaatgtggagaaaaaagactcaga 360
|||| || || |||||| |||||||| ||| ||||||||||||||||| |||||||||||
Sbjct: 2206 aatctcctaattagagatgagaatgg-acgtacagcaaatgtggagaataaagactcaga 2264
Query: 361 tgatacaaagagatcttctcattctcgtggcgggcgtcgtggccgtagtaatcgtggtcg 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2265 tgatacaaagagatcttctcattctcgtggcggtcgtcgtggccgtagtaatcgtggtcg 2324
Query: 421 tggtgcctccgggagkkktggtcattacaaaaattcacccaaaaaaacaagaaacctgaa 480
||||||||||||||| |||||||| ||||||||| || |||||||| ||||||||||
Sbjct: 2325 tggtgcctccgggaggggtggtcatttcaaaaattctcctaaaaaaac-tgaaacctgaa 2383
Query: 481 tgttggttagaaaggactattaacaggaaaaaagatatcacagcagtaaaaaatgcttag 540
|||||||| ||| ||||||||||||| ||| | ||||||| ||||||| |||||||||
Sbjct: 2384 tgttggtttgaatggactattaacagtaaatattatatcacttcagtaaataatgcttag 2443
Query: 541 gatanaagaa 550
||| |||||
Sbjct: 2444 tatataagaa 2453
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3739
Number of Sequences: 1807
Number of extensions: 3739
Number of successful extensions: 98
Number of sequences better than 1.0e-20: 1
length of query: 550
length of database: 10,358,551
effective HSP length: 16
effective length of query: 534
effective length of database: 10,329,639
effective search space: 5516027226
effective search space used: 5516027226
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)